# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "codyn" in publications use:' type: software license: Apache-2.0 title: 'codyn: Community Dynamics Metrics' version: 2.0.5 doi: 10.5063/F1N877Z6 identifiers: - type: doi value: 10.32614/CRAN.package.codyn abstract: 'Univariate and multivariate temporal and spatial diversity indices, rank abundance curves, and community stability measures. The functions implement measures that are either explicitly temporal and include the option to calculate them over multiple replicates, or spatial and include the option to calculate them over multiple time points. Functions fall into five categories: static diversity indices, temporal diversity indices, spatial diversity indices, rank abundance curves, and community stability measures. The diversity indices are temporal and spatial analogs to traditional diversity indices. Specifically, the package includes functions to calculate community richness, evenness and diversity at a given point in space and time. In addition, it contains functions to calculate species turnover, mean rank shifts, and lags in community similarity between two time points. Details of the methods are available in Hallett et al. (2016) and Avolio et al. (2019) .' authors: - family-names: Hallett given-names: Lauren email: lauren.m.hallett@gmail.com orcid: https://orcid.org/0000-0002-0718-0257 - family-names: Avolio given-names: Meghan L. email: meghan.avolio@jhu.edu orcid: https://orcid.org/0000-0002-2649-9159 - family-names: Carroll given-names: Ian T. email: carroll.ian@gmail.com orcid: https://orcid.org/0000-0002-3616-810X - family-names: Jones given-names: Sydney K. email: syd@sevilleta.unm.edu - family-names: MacDonald given-names: A. Andrew M. email: a.a.m.macdonald@gmail.com orcid: https://orcid.org/0000-0003-1162-169X - family-names: Flynn given-names: Dan F. B. email: flynn@fas.harvard.edu orcid: https://orcid.org/0000-0002-2978-5257 - family-names: Slaughter given-names: Peter email: slaughter@nceas.ucsb.edu orcid: https://orcid.org/0000-0002-2192-403X - family-names: Ripplinger given-names: Julie email: julie.ripplinger@asu.edu orcid: https://orcid.org/0000-0002-2771-6637 - family-names: Collins given-names: Scott L. email: scollins@sevilleta.unm.edu orcid: https://orcid.org/0000-0002-0193-2892 - family-names: Gries given-names: Corinna email: cgries@wisc.edu orcid: https://orcid.org/0000-0002-9091-6543 - family-names: Jones given-names: Matthew B. email: jones@nceas.ucsb.edu orcid: https://orcid.org/0000-0003-0077-4738 preferred-citation: type: manual title: 'codyn: Community Dynamics Metrics' authors: - family-names: Hallett given-names: Lauren email: lauren.m.hallett@gmail.com orcid: https://orcid.org/0000-0002-0718-0257 - family-names: Avolio given-names: Meghan L. email: meghan.avolio@jhu.edu orcid: https://orcid.org/0000-0002-2649-9159 - family-names: Carroll given-names: Ian T. email: icarroll@sesync.org orcid: https://orcid.org/0000-0002-3616-810X - family-names: Jones given-names: Sydney K. email: syd@sevilleta.unm.edu - family-names: MacDonald given-names: A. Andrew M. email: a.a.m.macdonald@gmail.com orcid: https://orcid.org/0000-0003-1162-169X - family-names: Flynn given-names: Dan F. B. email: flynn@fas.harvard.edu orcid: https://orcid.org/0000-0002-2978-5257 - family-names: Slaughter given-names: Peter email: slaughter@nceas.ucsb.edu orcid: https://orcid.org/0000-0002-2192-403X - family-names: Ripplinger given-names: Julie email: julie.ripplinger@asu.edu orcid: https://orcid.org/0000-0002-2771-6637 - family-names: Collins given-names: Scott L. email: scollins@sevilleta.unm.edu orcid: https://orcid.org/0000-0002-0193-2892 - family-names: Gries given-names: Corinna email: cgries@wisc.edu orcid: https://orcid.org/0000-0002-9091-6543 - family-names: Jones given-names: Matthew B. email: jones@nceas.ucsb.edu orcid: https://orcid.org/0000-0003-0077-4738 year: '2020' notes: R package version 2.0.5 url: https://github.com/NCEAS/codyn doi: 10.5063/F1N877Z6 repository: https://dataoneorg.r-universe.dev repository-code: https://github.com/NCEAS/codyn commit: d09e65b2d73bdf7f82e6953326b7dbd2c2a8198b url: https://github.com/NCEAS/codyn/ date-released: '2020-11-30' contact: - family-names: Jones given-names: Matthew B. email: jones@nceas.ucsb.edu orcid: https://orcid.org/0000-0003-0077-4738